While the post-Hobby Lobby meltdown continues on the cultural and journalistic left — this New Yorker piece is beyond parody — it’s important to remember that, from a church-state separation point of view, the most serious issues linked to the Health & Human Services mandate have not been settled. Here at GetReligion, we have been urging reporters and editors to look at this as a story that is unfolding on three levels.

(1) First, there are churches, synagogues, mosques and other religious institutions that are directly linked to “freedom of worship” and, thus, in the eyes of the White House, should be granted a full exemption by the state. The problem is that the U.S. Supreme Court has never been anxious to define what is and what is not “worship,” since that is a doctrinal matter.

(2) Religious ministries, non-profits and schools that — functioning as voluntary associations — believe that their work in the public square should continue to be defined by specific doctrines and traditions. The leaders of these groups, for religious reasons, also believe that these doctrines and traditions should either be affirmed by their employees or that, at the very least, that their employees should not expect the organization’s aid in opposing them. In other words, these ministries do not want to fund acts that they consider sinful or cooperate in their employees (or others in the voluntary community, such as students) being part of such activities. More on this shortly.